Ignoring temperature variation leads to underestimation of the temperature sensitivity of plant litter decomposition

Figure provided by Nate Tomaczyk

The majority of terrestrial net primary production decomposes, fueling detrital food webs and converting dead plant carbon to atmospheric CO 2. There is considerable interest in determining the sensitivity of this process to climate warming. A common approach has been to use spatial gradients in temperature (i.e., latitude or elevation) to estimate temperature sensitivity. However, these studies typically relate decomposition rates to average temperatures at each site along such gradients, ignoring within‐site temperature variation. To evaluate the potential effects of temperature variation on estimates of temperature sensitivity, we simulated plant litter decomposition using both randomly generated and real time series of temperature. This simulation approach illustrated how temperature variation leads to higher decomposition rates at a given mean temperature than is predicted from simulations in which temperature is held constant. Increases in decomposition rate were most evident at cooler sites, where temporal variation in temperature tends to be greater than at warmer sites. This unbalanced effect of temperature variation shifted the slope of the relationships between average temperature and decomposition rate, resulting in lower estimated temperature sensitivities than were used to simulate decomposition. For example, estimates of activation energy (a) were as much as 0.15 eV lower than the true a when decomposition was simulated with the true a set to the canonical respiration value of 0.65 eV . We found that the estimated a was lower than the true a for surface, soil, and air temperatures, but not for stream temperatures, for which there was only a weak relationship between temperature variation and mean temperature. Our results suggest that commonly used methods may underestimate the temperature dependence of litter decomposition, particularly in terrestrial environments. We encourage publication of temperature data that include variation estimates and suggest an alternative method for calculating temperature sensitivity that accounts for variation in temperature.

Tomczyk NJ, Rosemond AD, Bumpers PM, Cummins CS, Wenger SJ, Benstead JP. Ignoring temperature variation leads to underestimation of the temperature sensitivity of plant litter decomposition. Ecosphere. 2020 Feb;11(2):e03050. doi: 10.1002/ecs2.3050.

Incorporating spatial synchrony in the status assessment of a threatened species with multivariate analysis

A painting of the study organism, the Amber Darter (Percina antesella). Artist: Carol Yang.

Spatial synchrony—correlated abundance fluctuations among distinct populations—is associated with increased extinction risk but is not a component of widely-used extinction risk assessments (e.g., IUCN Red List, U.S. Fish and Wildlife Service’s Species Status Assessment). Alongside traditional viability metrics (i.e., the number of populations, their spatial extent, the status of each population), consideration of spatial synchrony in these assessments may provide additional insight into extinction risk as well as the relative importance of intrinsic and extrinsic factors on population dynamics. We demonstrate a method for estimating abundance trends in populations of the endangered freshwater fish, the amber darter (Percina antesella), while simultaneously assessing empirical support for existence of spatial synchrony among its two populations in the Conasauga and Etowah rivers in Georgia, U.S.A. Our analysis was performed using multivariate autoregressive state-space (MARSS) models with annual sampling data from 1996 to 2018 at 16 sites distributed between the two rivers. Our results indicate that amber darter populations have declined substantially, with 9% annual losses in both the Conasauga and Etowah rivers, suggesting rangewide imperilment. Furthermore, model selection indicated little support for models with fully independent dynamics between rivers, which may compound overall extinction risk. This analysis demonstrates the utility of tools such as MARSS models for assessing spatial synchrony and long-term population trajectories of imperiled species, resulting in improved vulnerability assessments that do not assume independence among separate populations.

Stowe, E.S., Wenger, S.J., Freeman, M.C. and Freeman, B.J., 2020. Incorporating spatial synchrony in the status assessment of a threatened species with multivariate analysis. Biological Conservation248, p.108612. doi: 10.1016/j.biocon.2020.108612

Spatial and temporal variation in nest temperatures forecasts sex ratio skews in a crocodilian with environmental sex determination

Picture: Samantha Bock

Check out this news article, “Why baby alligators in some spots could be 98% female by century’s end” in Nature covering the research!

Species displaying temperature-dependent sex determination (TSD) are especially vulnerable to the effects of a rapidly changing global climate due to their profound sensitivity to thermal cues during development. Predicting the consequences of climate change for these species, including skewed offspring sex ratios, depends on understanding how climatic factors interface with features of maternal nesting behaviour to shape the developmental environment. Here, we measure thermal profiles in 86 nests at two geographically distinct sites in the northern and southern regions of the American alligator’s (Alligator mississippiensis) geographical range, and examine the influence of both climatic factors and maternally driven nest characteristics on nest temperature variation. Changes in daily maximum air temperatures drive annual trends in nest temperatures, while variation in individual nest temperatures is also related to local habitat factors and microclimate characteristics. Without any compensatory nesting behaviours, nest temperatures are projected to increase by 1.6–3.7°C by the year 2100, and these changes are predicted to have dramatic consequences for offspring sex ratios. Exact sex ratio outcomes vary widely depending on site and emission scenario as a function of the unique temperature-by-sex reaction norm exhibited by all crocodilians. By revealing the ecological drivers of nest temperature variation in the American alligator, this study provides important insights into the potential consequences of climate change for crocodilian species, many of which are already threatened by extinction.

Bock SL, Lowers RH, Rainwater TR, Stolen E, Drake JM, Wilkinson PM, Weiss S, Back B, Guillette Jr L, Parrott BB. Spatial and temporal variation in nest temperatures forecasts sex ratio skews in a crocodilian with environmental sex determination. Proceedings of the Royal Society B. 2020 May 13;287(1926): 20200210.

A comparison of diversity estimators applied to a database of host–parasite associations

Figure provided by Claire Teitelbaum

Understanding the drivers of biodiversity is important for forecasting changes in the distribution of life on earth. However, most studies of biodiversity are limited by uneven sampling effort, with some regions or taxa better sampled than others. Numerous methods have been developed to account for differences in sampling effort, but most methods were developed for systematic surveys in which all study units are sampled using the same design and assemblages are sampled randomly. Databases compiled from multiple sources, such as from the literature, often violate these assumptions because they are composed of studies that vary widely in their goals and methods. Here, we compared the performance of several popular methods for estimating parasite diversity based on a large and widely used parasite database, the Global Mammal Parasite Database (GMPD). We created artificial datasets of host–parasite interactions based on the structure of the GMPD, then used these datasets to evaluate which methods best control for differential sampling effort. We evaluated the precision and bias of seven methods, including species accumulation and nonparametric diversity estimators, compared to analyzing the raw data without controlling for sampling variation. We find that nonparametric estimators, and particularly the Chao2 and second‐order jackknife estimators, perform better than other methods. However, these estimators still perform poorly relative to systematic sampling, and effect sizes should be interpreted with caution because they tend to be lower than actual effect sizes. Overall, these estimators are more effective in comparative studies than for producing true estimates of diversity. We make recommendations for future sampling strategies and statistical methods that would improve estimates of global parasite diversity.

Also highlighted on UGA’s Center for the Ecology of Infectious Disease website.

Teitelbaum, C.S., Amoroso, C.R., Huang, S., Davies, T.J., Rushmore, J., Drake, J.M., Stephens, P.R., Byers, J.E., Majewska, A.A. and Nunn, C.L. (2020), A comparison of diversity estimators applied to a database of host–parasite associations. Ecography. doi:10.1111/ecog.05143

City sicker? A meta‐analysis of wildlife health and urbanization

Photo Credit: Maureen Murray

Urban development can alter resource availability, land use, and community composition, which, in turn, influences wildlife health. Generalizable relationships between wildlife health and urbanization have yet to be quantified and could vary across different measures of health and among species. We present a phylogenetic meta‐analysis of 516 comparisons of the toxicant loads, parasitism, body condition, or stress of urban and non‐urban wildlife populations reported in 106 studies spanning 81 species in 30 countries. We found a small but significant negative relationship between urbanization and wildlife health, driven by considerably higher toxicant loads and greater parasite abundance, greater parasite diversity, and/or greater likelihood of infection by parasites transmitted through close contact. Invertebrates and amphibians were particularly affected, with urban populations having higher toxicant loads and greater physiological stress than their non‐urban counterparts. We also found strong geographic and taxonomic bias in research effort, highlighting future research needs. Our results suggest that some types of health risks are more pronounced for wildlife in urban areas, which could have important implications for conservation.

Murray, M. H., C. A. Sánchez, D. J. Becker, K. A. Byers, K. E. Worsley‐Tonks, and M. E. Craft. 2019. City sicker? A meta-analysis of wildlife health and urbanization. Frontiers in Ecology and the Environment. https://doi.org/10.1002/fee.2126
Read about this article in The Conversation.

Microclimate and larval habitat density predict adult Aedes Albopictus abundance in urban areas

The Asian tiger mosquito, , transmits several arboviruses of public health importance, including chikungunya and dengue. Since its introduction to the United States in 1985, the species has invaded more than 40 states, including temperate areas not previously at risk of -transmitted arboviruses. Mathematical models incorporate climatic variables in predictions of site-specific abundances to identify human populations at risk of disease. However, these models rely on coarse resolutions of environmental data that may not accurately represent the climatic profile experienced by mosquitoes in the field, particularly in climatically heterogeneous urban areas. In this study, we pair field surveys of larval and adult mosquitoes with site-specific microclimate data across a range of land use types to investigate the relationships between microclimate, density of larval habitat, and adult mosquito abundance and determine whether these relationships change across an urban gradient. We find no evidence for a difference in larval habitat density or adult abundance between rural, suburban, and urban land classes. Adult abundance increases with increasing larval habitat density, which itself is dependent on microclimate. Adult abundance is strongly explained by microclimate variables, demonstrating that theoretically derived, laboratory-parameterized relationships in ectotherm physiology apply to the field. Our results support the continued use of temperature-dependent models to predict abundance in urban areas.

Full text: https://doi.org/10.4269/ajtmh.19-0220

Evans, M. V., C. W. Hintz, L. Jones, J. Shiau, N. Solano, J. M. Drake, and C. C. Murdock. 2019. Microclimate and larval habitat density redict adult Aedes albopictus abundance in urban areas. The American Journal of Tropical Medicine and Hygiene.

Patterns and drivers of fish extirpations in rivers of the American Southwest and Southeast

Effective conservation of freshwater biodiversity requires spatially explicit investigations of how dams and hydroclimatic alterations among climate regions may interact to drive species to extinction. We investigated how dams and hydroclimatic alterations interact with species ecological and life history traits to influence past extirpation probabilities of native freshwater fishes in river basins in the southwestern and southeastern US. Using long-term data from stream and river gages, we related extirpation probabilities of native fishes in both regions to streamflow anomalies, river basin characteristics, species traits, and non-native species richness using binomial logistic regression. Extirpations in the Southwest were highest in lowland mainstem rivers impacted by large dams and in desert springs. Dampened flow seasonality, increased longevity (i.e., delayed reproduction), and decreased fish egg sizes (i.e., lower parental care) were related to elevated fish extirpation probability in the Southwest. Extirpations in the Southeast were most prevalent in upland rivers in species with flow dependency, greater age and length at maturity, isolation by dams, and at a greater distance upstream. Our results confirm that dams are an overriding driver of native fish species losses, irrespective of basin-wide differences in native or non-native species richness. Dams and hydrologic alterations interact with species traits to influence community disassembly, and very high extirpation risks in the Southeast are due to interactions between high dam density and species restricted ranges. Given global surges in dam building and retrofitting, increased extirpation risks should be expected unless management strategies that balance flow regulation with ecological outcomes are widely implemented.

See full text at: https://doi.org/10.1111/gcb.13940

Kominoski, J.S., Ruhí, A., Hagler, M.M., Petersen, Kelly, Sabo, J.L., Sinha, T., Sankarasubramanian, A., & Olden, J.D. (2018). Patterns and drivers of fish extirpations in rivers of the American Southwest and Southeast. Global Change Biology, 24(3), 1175-1185.

Migratory behaviour predicts greater parasite diversity in ungulates

Long-distance animal movements can increase exposure to diverse parasites, but can also reduce infection risk through escape from contaminated habitats or culling of infected individuals. These mechanisms have been demonstrated within and between populations in single-host/single-parasite interactions, but how long-distance movement behaviours shape parasite diversity and prevalence across host taxa is largely unknown. Using a comparative approach, we analyse the parasite communities of 93 migratory, nomadic and resident ungulate species. We find that migrants have higher parasite species richness than residents or nomads, even after considering other factors known to influence parasite diversity, such as body size and host geographical range area. Further analyses support a novel ‘environmental tracking’ hypothesis, whereby migration allows parasites to experience environments favourable to transmission year-round. In addition, the social aggregation and large group sizes that facilitate migration might increase infection risk for migrants. By contrast, we find little support for previously proposed hypotheses, including migratory escape and culling, in explaining the relationship between host movement and parasitism in mammals at this cross-species scale. Our findings, which support mechanistic links between long-distance movement and increased parasite richness at the species level, could help predict the effects of future environmental change on parasitism in migratory animals.

See full text at: https://doi.org/10.1098/rspb.2018.0089

Teitelbaum, C.S., Huang, S., Hall, R.J. & Altizer, S. (2018). Migratory behaviour predicts greater parasite diversity in ungulates. Proceedings of the Royal Society B: Biological Sciences, 285(1875), 1-8.

Mucus-net producing snails modify water flow and molecular transport potential over corals and coral-algal interactions

Interaction modifications arise when a third species alters the strength and direction of a pairwise interaction. One way in which an interaction modifier can influence an interaction is through changing the physical environment and creating conditions that favor one species over another. On coral reefs, coral-algal competition is a wide-spread phenomenon that can be modified by water flow. Additionally, sessile (stationary), net-producing vermetid gastropods can be ubiquitous and known to negatively affect coral growth and survival. Although the putative mechanism underlying the snail’s effect is the mucus net, how the net may affect corals was unknown. In our paper, we showed that the mucus net modified water flow and the thickness of the diffusive boundary layer (the region in which molecular transport occurs) over corals and over coral-algal interactions. Our results suggest that the negative effects of vermetids on corals are due to the trapping of noxious conditions over coral surfaces, which likely intensifies competition between corals and algae.

See full text at: https://doi.org/10.1007/s00442-018-4091-9

Brown, A.L. & Osenberg, C.W. (2018). Vermetid gastropods modify physical and chemical conditions above coral–algal interactions. Oecologia (online early).

Native Lake Sturgeon eat more fish (and sooner) in response to Round Goby invasion: A silver lining to an invasive cloud?

Species invasions are ubiquitous in ecosystems across the world, and the Laurentian Great Lakes ecosystem is no exception. Round Goby, a small benthic fish species, have invaded each of the Great Lakes, spreading to Lake Ontario by 2002. The Great Lakes are home to a number of native fish species that are imperiled and of high conservation interest. One of these is the Lake Sturgeon, of which relatively few relict populations still persist, and for which population densities are far below historical records. This paper presents evidence that invasive Round Goby in Lake Ontario are not only eaten by Lake Sturgeon, a large-bodied benthic consumer and putative invertivore, they’ve allowed Lake Sturgeon to shift feeding ecology toward increased predation on fish at smaller size and younger age. The net effect of Round Goby on Lake Sturgeon in this system is still poorly understood: the effects of other species interactions between Round Goby and Lake Sturgeon, and the indirect effects of shifting food web structure on Lake Sturgeon are unknown. However, the shift in feeding ontogeny we document may actually have a positive effect on Lake Sturgeon access higher-quality prey (namely Round Goby) at smaller size and younger age; thereby eating more fish, and sooner. This highlights the complexity of ecosystem responses to species invasions. Though Round Goby have had a strong negative overall effect on the Great Lakes system, the shift in Lake Sturgeon feeding ecology we observe may have a positive effect on this native species.

See full text at: https://link.springer.com/article/10.1007/s10530-017-1376-6/fulltext.html

Jacobs, G. R., Bruestle, E. L., Hussey, A., Gorsky, D., & Fisk, A. T. (2017). Invasive species alter ontogenetic shifts in the trophic ecology of Lake Sturgeon (Acipenser fulvescens) in the Niagara River and Lake Ontario. Biological Invasions, 10(5), 1533–1546. https://doi.org/10.1007/s10530-017-1376-6.